Licencing

The RNAseqPipe pipeline uses several third-party tools and methods in order to process data. The following list contains all tools and methods with respective links to the corresponding webpages. For licencing information regarding these methods and tools, please see the respective web pages.

• fastp(version)
• STAR
• RSEM
• Qualimap
• DAtools
• MultiQC
• GSEA
• Several R packages for downstream analysis.

The RNAseqPipe pipeline is available free of charge for academic purposes. The pipeline is available under GPLv3 (see source code on GitHub, too). For more information see the Docker Image Installation Instructions.